Тип публикации: доклад, тезисы доклада, статья из сборника материалов конференций
Конференция: Siberian Scientific Workshop on Data Analysis Technologies with Applications, SibDATA 2020
Год издания: 2020
Ключевые слова: clustering, distribution, evolution, order, symmetry
Аннотация: A seven-cluster pattern for bacterial genomes has been reported. The pattern is revealed through the distribution of formally identified short fragments of a genome converted into triplet frequency dictionaries. The pattern is found to be dependent on the parameters of the genome fragmentation, namely the length of a formally identified fragment within the genome, and the move step to identify the fragments to obtain an ensemble to reveal the clustering pattern. Here, we present the results of the studying the impact of the fragment length on the type and shape of the pattern. Copyright © 2020 for this paper by its authors.
Издание
Журнал: CEUR Workshop Proceedings
Выпуск журнала: Vol. 2727
Номера страниц: 8-15
ISSN журнала: 16130073
Издатель: CEUR-WS
Персоны
- Gustov V. (Siberian Federal University, 79 Svobodny st., Krasnoyarsk, 660041, Russian Federation)
- Senashova M. (Institute of Computational Modelling of the Siberian Branch, Russian Academy of Sciences, 50/44 Akademgorodok, Krasnoyarsk, 660036, Russian Federation)
- Sadovsky M. (Institute of Computational Modelling of the Siberian Branch, Russian Academy of Sciences, 50/44 Akademgorodok, Krasnoyarsk, 660036, Russian Federation)
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